A few things to think about. The CM FLFW is a cheap and is prone to fail there was another member that had one of these on his car and he had bad timing issues as well his clutch masters clutch never held up and when he switched over to a Full JHM clutch and flywheel the issue went away . A third guy had same issues also fixed after his CM clutch failed to hold the power. I don’t know to say much past that. Maybe the harmonics are bad in what they sell.
Also didn’t you have a issue with you having a fault code for a knock sensor and the corresponding sensor was in a position that didn’t seem to match up?
Something is going on to have your car telling the request to go negative. I can tell you its going to have to be hardware related somewhere. Even with all the issues Ive seen with the CM units I don’t think this can all be attributed to that